slinusc commited on
Commit
33ca16d
·
verified ·
1 Parent(s): 26fe5eb

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +3 -23
README.md CHANGED
@@ -8,11 +8,7 @@ pretty_name: PubMedAbstractSubset
8
  ---
9
  # PubMed Abstracts Subset (10%)
10
 
11
- This dataset contains a 10% probabilistic sample of the ~24 million PubMed abstracts available as public metadata from the [National Library of Medicine (NLM)](https://pubmed.ncbi.nlm.nih.gov/). The dataset was originally compiled and released as part of the [MedRAG benchmark](https://arxiv.org/abs/2402.13178), and has been reformatted and republished as part of the study:
12
-
13
- **Stuhlmann et al. (2025)**
14
- *Efficient and Reproducible Biomedical Question Answering using Retrieval‑Augmented Generation*
15
- → [arXiv:2505.07917](https://arxiv.org/abs/2505.07917)
16
 
17
  ---
18
 
@@ -77,30 +73,14 @@ Each file is in `.jsonl` (JSON Lines) format, where each line is a valid JSON ob
77
 
78
  This dataset is derived from public domain PubMed metadata (titles and abstracts), redistributed in accordance with [NLM data usage policies](https://www.nlm.nih.gov/databases/download/data_distrib_main.html).
79
 
80
- - Reformatted and used in:
81
  **Stuhlmann et al. (2025)**, *Efficient and Reproducible Biomedical QA using RAG*, [arXiv:2505.07917](https://arxiv.org/abs/2505.07917)
82
 
83
  ---
84
 
85
- ## ✨ Citation
86
-
87
- If you use this dataset, please cite:
88
-
89
- ```
90
-
91
- @article{stuhlmann2025efficient,
92
- title={Efficient and Reproducible Biomedical Question Answering using Retrieval-Augmented Generation},
93
- author={Stuhlmann, Linus and Saxer, Michael Alexander and Fürst, Jonathan},
94
- journal={arXiv preprint arXiv:2505.07917},
95
- year={2025}
96
- }
97
- ```
98
-
99
- ---
100
-
101
  ## 🏷️ Version
102
 
103
- - `v1.0` – Initial release (10% sample, 2.39M entries, 24 JSONL files)
104
 
105
  ---
106
 
 
8
  ---
9
  # PubMed Abstracts Subset (10%)
10
 
11
+ This dataset contains a probabilistic sample of all publicly available PubMed metadata from the [National Library of Medicine (NLM)](https://pubmed.ncbi.nlm.nih.gov/).
 
 
 
 
12
 
13
  ---
14
 
 
73
 
74
  This dataset is derived from public domain PubMed metadata (titles and abstracts), redistributed in accordance with [NLM data usage policies](https://www.nlm.nih.gov/databases/download/data_distrib_main.html).
75
 
76
+ - Used in:
77
  **Stuhlmann et al. (2025)**, *Efficient and Reproducible Biomedical QA using RAG*, [arXiv:2505.07917](https://arxiv.org/abs/2505.07917)
78
 
79
  ---
80
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
81
  ## 🏷️ Version
82
 
83
+ - `v1.0` – Initial release (2.39M entries, 24 JSONL files)
84
 
85
  ---
86